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Resource

index/Resource

Database

STAB

Nucleic Acids Research

STAB (a Spatio-Temporal cell Atlas of the human Brain) is a comprehensive cell atlas resource for the human brain, covering multiple brain regions from early fetal to adolescence and aging.
mMGE

Nucleic Acids Research

mMGE is a database of human metagenomic extrachromosomal mobile genetic elements. Currently mMGE contains a total of 517 251 non-redundant eMGEs, including 92 492 plasmids and 424 759 phages, that we identified from 66 425 human metagenomic samples. In addition to basic information (including sequence characteristics, interactions with prokaryotic hosts, gene contents and taxonomic annotations), the extensive metadata of the samples, the abundances and distributions of the eMGEs across samples, phenotypes and populations are also available, allowing users to explore their biological functions, biogeographical patterns and habitat preferences.
Multimorbidity

Genome Medicine

Multimorbidity is a website that records information about common diseases and comorbidities. The website provides the comorbid relationships among 439 common diseases and their associations at different genetic levels, including SNP, gene, PPI, pathway, and genetic correlation.
mTD

Journal of Genetics and Genomics

The database of microRNAs affecting Therapeutic effects of Drugs (mTD) aims to provide comprehensive information about the effects of miRNAs on drug therapies.
GEAR

Scientific Reports

The database of Genomic Elements Associated with drug Resistance (GEAR) aims to provide comprehensive information about genomic patterns associated with resistance to human drugs, including gene or microRNA mutations responsible for drug resistance.
PPIM

Plant Physiology

Maize (Zea mays) is the plant that has the highest world-wide production among all grain crops, and maize seeds are the most important crop materials that provide resources for food, feed, biofuel, and raw material for processing. The PPIM (protein-protein interaction database for Maize) database is a free and comprehensive knowledgebase for academic use in Zea mays community.
eFG

Database

eFG (ebook for Fusarium Graminearum) is an information query system for the pathogenic fungus Fusarium graminearum. It contains many information for F. graminearum that the sequences, proteins, annotations, protein-protein interaction, pathogenic genes, sub-location of proteins, transcription factors and ortholog information with other fungi.
DIPOS

Molecular BioSystems

DIPOS provides a complete rice protein interaction database to the plant biologist to better understand the life of plants, especially for rice.
FPPI

Journal of Proteome Research

FPPI is a database about protein-protein interactions for Fussarium graminearum, which contain 223,116 interactions among 7,406 proteins and 27,102 interactions among 3,745 proteins in the core PPI set. Furthermore, this database contains various different functional information for F. graminearum genes.

Links： Aihara Group Kim Group Bork Group Chen Lab Gerstein Lab

Resource

Database

STAB

Nucleic Acids Research

mMGE

Nucleic Acids Research

Multimorbidity

Genome Medicine

mTD

Journal of Genetics and Genomics

GEAR

Scientific Reports

PPIM

Plant Physiology

eFG

Database

DIPOS

Molecular BioSystems

FPPI

Journal of Proteome Research