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Enterotypes of the human gut mycobiome
Senying Lai
Yan Yan
Yanni Pu
Shuchun Lin
Jian-Ge Qiu
Bing-Hua Jiang
Marisa Isabell Keller
Mingyu Wang
Peer Bork
Wei-Hua Chen
Yan Zheng
Xing-Ming Zhao
Microbiome
2023
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Prioritizing genes associated with brain disorders by leveraging enhancer-promoter interactions in diverse neural cells and tissues
Xingzhong Zhao
Liting Song
Anyi Yang
Zichao Zhang
Jinglong Zhang
Yucheng T Yang
Xing-Ming Zhao
Genome Medicine
2023
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Long-Read Sequencing Reveals Extensive DNA Methylations in Human Gut Phagenome Contributed by Prevalently Phage-Encoded Methyltransferases
Chuqing Sun
Jingchao Chen
Menglu Jin
Xueyang Zhao
Yun Li
Yanqi Dong
Na Gao
Zhi Liu
Peer Bork
Xing-Ming Zhao
Wei-Hua Chen
Advanced Science
2023
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A pangenome reference of 36 Chinese populations
Yang Gao
Xiaofei Yang
Hao Chen
Xinjiang Tan
Zhaoqing Yang
Lian Deng
Baonan Wang
Shuang Kong
Songyang Li
Yuhang Cui
Chang Lei
Yimin Wang
Yuwen Pan
Sen Ma
Hao Sun
Xiaohan Zhao
Yingbing Shi
Ziyi Yang
Dongdong Wu
Shaoyuan Wu
Xingming Zhao
Binyin Shi
Li Jin
Zhibin Hu
Chinese Pangenome Consortium (CPC)
Yan Lu
Jiayou Chu
Kai Ye
Shuhua Xu
Nature
2023
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Improving Alzheimer’s Disease Diagnosis with Multi-Modal PET Embedding Features by a 3D Multi-task MLP-Mixer Neural Network
ZC Zhang
X Zhao
G Dong
XM Zhao
IEEE Journal of Biomedical and Health Informatics
2023
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A survey on computational strategies for genome-resolved gut metagenomics
L Jia
Y Wu
Y Dong
J Chen
WH Chen
XM Zhao
Briefings in Bioinformatics
2023
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Performance of Gut Microbiome as an Independent Diagnostic Tool for 20 Diseases: Cross-Cohort Validation of Machine-Learning Classifiers
M Li
J Liu
J Zhu
H Wang
C Sun
NL Gao
XM Zhao
WH Chen
Gut Microbes
2023
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Deciphering the genetic architecture of human brain structure and function: a brief survey on recent advances of neuroimaging genomics
X Zhao
A Yang
ZC Zhang
YT Yang
XM Zhao
Briefings in Bioinformatics
2023
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TadA orthologs enable both cytosine and adenine editing of base editors
S Zhang
B Yuan
J Cao
L Song
J Chen
J Qiu
Z Qiu
XM Zhao
J Chen
TL Cheng
Nature Communications
2023
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TadA reprogramming to generate potent miniature base editors with high precision
S Zhang
L Song
B Yuan
C Zhang
J Cao
J Chen
J Qiu
Y Tai
J Chen
Z Qiu
XM Zhao
TL Cheng
Nature Communications
2023
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Links:
Aihara Group
Kim Group
Bork Group
Chen Lab
Gerstein Lab